Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX392103: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-295505' containing sample 'Staphylococcus aureus H57822'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.8M spots, 764.8M bases, 376.7Mb downloads

UUID: e596010b-410a-4421-8779-7c024d75458a

Design: Illumina sequencing of Staphylococcus aureus H57822 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224616 • SRP034194 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus H57822

SAMN02384081 • SRS515296 • All experiments • All runs

Organism: Staphylococcus aureus H57822

Library:

Name: Pond-295505

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 435353.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:543KA

material_type: DNA:DNA Somatic

product_order: PDO-2359

product_part_number: P-WG-0004

project: G50997

research_project: RP-509

root_sample_id: SM-4T3DP

sample_id: SM-543KA

work_request: 38945

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-02 16:38:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.8M spots, 764.8M bases, 376.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050004	3,785,978	764.8M	376.7Mb	2013-12-15

ID:: 562950

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